STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA06010.1NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. (449 aa)    
Predicted Functional Partners:
SJZ84839.1
Glutamate synthase (NADH) large subunit.
    
 0.978
napA
Periplasmic nitrate reductase subunit NapA apoprotein; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
   
 0.932
SKA15974.1
Flavorubredoxin.
    
 0.909
SKA14713.1
Nitrite reductase (NADH) small subunit.
  
 0.893
SKA12155.1
3-mercaptopyruvate sulfurtransferase SseA, contains two rhodanese domains.
 
 0.840
SKA10015.1
3-mercaptopyruvate sulfurtransferase SseA, contains two rhodanese domains.
 
 0.830
rpmE
LSU ribosomal protein L31P; Binds the 23S rRNA.
   
    0.730
SJZ96092.1
Riboflavin synthase alpha chain.
   
    0.730
SKA02707.1
Acyl transferase domain-containing protein.
  
 0.682
SJZ96320.1
Cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein.
  
 
 0.676
Your Current Organism:
Geobacter thiogenes
NCBI taxonomy Id: 115783
Other names: ATCC BAA-34, G. thiogenes, Geobacter thiogenes (De Wever et al. 2001) Nevin et al. 2007, JCM 14045, Trichlorobacter thiogenes, Trichlorobacter thiogenes De Wever et al. 2001, strain K1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.