STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000745395_02088Unannotated protein. (449 aa)    
Predicted Functional Partners:
GCA_000745395_00556
Unannotated protein.
 
 0.999
GCA_000745395_00558
Unannotated protein.
 0.999
GCA_000745395_00555
Unannotated protein.
 0.998
GCA_000745395_02087
Unannotated protein.
 
 
 0.983
GCA_000745395_01875
Unannotated protein.
 
 
 0.980
GCA_000745395_00114
Unannotated protein.
 
 
 0.960
GCA_000745395_02055
Unannotated protein.
 
  
 0.959
GCA_000745395_01877
Unannotated protein.
 
  
 0.921
GCA_000745395_00560
Unannotated protein.
  
  
 
0.917
GCA_000745395_02086
Unannotated protein.
       0.824
Your Current Organism:
Thioalkalivibrio sp. ALJ1
NCBI taxonomy Id: 1158144
Other names: T. sp. ALJ1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.