STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000376845_00341Unannotated protein. (179 aa)    
Predicted Functional Partners:
GCA_000376845_00340
Unannotated protein.
 
     0.917
GCA_000376845_02264
Unannotated protein.
 
     0.773
GCA_000376845_02368
Unannotated protein.
  
     0.759
GCA_000376845_02894
Unannotated protein.
  
     0.759
GCA_000376845_00912
Unannotated protein.
 
     0.757
GCA_000376845_00631
Unannotated protein.
 
     0.756
GCA_000376845_00728
Unannotated protein.
 
     0.752
GCA_000376845_01026
Unannotated protein.
  
     0.747
GCA_000376845_01025
Unannotated protein.
  
     0.746
GCA_000376845_00318
Unannotated protein.
  
     0.733
Your Current Organism:
Thioalkalivibrio sp. ALE14
NCBI taxonomy Id: 1158168
Other names: T. sp. ALE14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.