STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000377405_01326Unannotated protein. (247 aa)    
Predicted Functional Partners:
GCA_000377405_01327
Unannotated protein.
 
     0.650
GCA_000377405_01328
Unannotated protein.
 
     0.597
GCA_000377405_00703
Unannotated protein.
  
     0.593
GCA_000377405_00536
Unannotated protein.
  
   
 0.572
GCA_000377405_01047
Unannotated protein.
   
    0.565
GCA_000377405_01325
Unannotated protein.
       0.543
GCA_000377405_02519
Unannotated protein.
  
     0.525
GCA_000377405_00751
Unannotated protein.
  
 
 
 0.519
GCA_000377405_02191
Unannotated protein.
  
   
 0.519
GCA_000377405_02394
Unannotated protein.
  
     0.492
Your Current Organism:
Thioalkalivibrio sp. ALE31
NCBI taxonomy Id: 1158182
Other names: T. sp. ALE31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.