STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000733775_00956Unannotated protein. (803 aa)    
Predicted Functional Partners:
GCA_000733775_00917
Unannotated protein.
 0.999
GCA_000733775_00955
Unannotated protein.
 0.999
GCA_000733775_00609
Unannotated protein.
 0.996
GCA_000733775_00954
Unannotated protein.
 0.996
GCA_000733775_00915
Unannotated protein.
 0.993
GCA_000733775_00957
Unannotated protein.
 
 0.993
GCA_000733775_00960
Unannotated protein.
 
 
 0.935
GCA_000733775_00961
Unannotated protein.
 
  
 0.924
GCA_000733775_00959
Unannotated protein.
 
     0.922
GCA_000733775_00958
Unannotated protein.
 
   
 0.913
Your Current Organism:
Thiomonas sp. FBCd
NCBI taxonomy Id: 1158292
Other names: T. sp. FB-Cd, Thiomonas sp. DSM 25617, Thiomonas sp. FB-Cd
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.