STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000381565_05815Unannotated protein. (235 aa)    
Predicted Functional Partners:
GCA_000381565_05816
Unannotated protein.
 
  
 0.963
GCA_000381565_05817
Unannotated protein.
 
  
 0.952
GCA_000381565_03353
Unannotated protein.
  
 
 0.903
GCA_000381565_00328
Unannotated protein.
  
 
 0.758
GCA_000381565_02302
Unannotated protein.
    
 0.735
GCA_000381565_00293
Unannotated protein.
    
 0.692
GCA_000381565_02436
Unannotated protein.
    
 0.692
GCA_000381565_00420
Unannotated protein.
  
 
 0.680
GCA_000381565_03190
Unannotated protein.
    
 0.670
GCA_000381565_02593
Unannotated protein.
    
 0.624
Your Current Organism:
Oxalobacteraceae bacterium AB14
NCBI taxonomy Id: 1158293
Other names: O. bacterium AB_14, Oxalobacteraceae bacterium AB_14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.