STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000377345_01744Unannotated protein. (192 aa)    
Predicted Functional Partners:
GCA_000377345_01745
Unannotated protein.
       0.825
GCA_000377345_01743
Unannotated protein.
  
    0.806
GCA_000377345_01742
Unannotated protein.
       0.562
GCA_000377345_02005
Unannotated protein.
     
 0.539
GCA_000377345_00345
Unannotated protein.
  
  
 0.478
GCA_000377345_01125
Unannotated protein.
 
   
 0.465
GCA_000377345_00778
Unannotated protein.
  
     0.423
GCA_000377345_02315
Unannotated protein.
  
  
 0.412
GCA_000377345_01330
Unannotated protein.
  
   
 0.408
GCA_000377345_02373
Unannotated protein.
     
 0.406
Your Current Organism:
Thioalkalivibrio sp. ALJ16
NCBI taxonomy Id: 1158762
Other names: T. sp. ALJ16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.