STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_7839Golgi complex component. (1577 aa)    
Predicted Functional Partners:
UV8b_7768
Putative PEP5 protein.
    
 
 0.984
UV8b_1339
Vacuolar protein sorting protein DigA.
    
 
 0.984
UV8b_5805
Vacuolar protein sorting 33A-like protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.971
UV8b_3815
Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.
    
 
 0.948
UV8b_7897
Uncharacterized protein.
    
 
 0.943
UV8b_6411
AvaB protein.
   
 
 0.939
UV8b_2723
Vacuolar sorting protein.
   
 
 0.936
UV8b_7840
PIG-P domain-containing protein.
 
      0.899
UV8b_6113
MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
    
 
 0.745
UV8b_1301
Rab5-like protein ypt51.
    
 
 0.745
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.