STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_7698Coiled-coil domain-containing protein. (213 aa)    
Predicted Functional Partners:
UV8b_5319
Kazal domain-containing protein.
    
 0.653
UV8b_4439
Carboxylesterase family protein.
    
 0.653
UV8b_3006
DNA binding domain with preference for A/T rich regions-like protein.
    
 0.653
UV8b_2017
LEA domain containing protein.
    
 0.653
UV8b_6178
Golgi matrix protein.
 
      0.637
UV8b_3404
Transcription factor IWS1.
      
 0.450
UV8b_4304
Tubulin-specific chaperone A; Belongs to the TBCA family.
   
    0.429
UV8b_8324
Histone H2B; Belongs to the histone H2B family.
    
   0.418
UV8b_4474
RNA polymerase i-specific transcription initiation factor rrn6-like protein.
    
   0.418
UV8b_4475
RNA polymerase i-specific transcription initiation factor rrn6-like protein.
    
   0.418
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.