STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_7897Uncharacterized protein. (285 aa)    
Predicted Functional Partners:
UV8b_5805
Vacuolar protein sorting 33A-like protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.981
UV8b_1339
Vacuolar protein sorting protein DigA.
   
 0.980
UV8b_7768
Putative PEP5 protein.
    
 0.977
UV8b_5425
Putative vacuolar assembly protein.
    
 0.977
UV8b_7839
Golgi complex component.
    
 
 0.943
UV8b_216
Putative Ras-related protein Rab7.
    
 
 0.941
UV8b_4497
t-SNARE coiled-coil homology domain-containing protein.
    
 
 0.938
UV8b_5192
Vesicle transport SNARE complex subunit protein.
    
 
 0.931
UV8b_307
SNARE domain-containing protein; Belongs to the synaptobrevin family.
    
 
 0.917
UV8b_6411
AvaB protein.
   
 0.912
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.