STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_6292ATPase type 13A2. (273 aa)    
Predicted Functional Partners:
UV8b_6628
Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.
 
      0.899
UV8b_6629
ATPase type 13A2.
 
      0.899
UV8b_203
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
    
 0.683
UV8b_2945
LEM3/CDC50 family protein; Belongs to the CDC50/LEM3 family.
    
 0.607
UV8b_3411
SWIRM domain-containing protein.
    
 0.607
UV8b_2983
Mitochondrial distribution and morphology protein.
 
      0.601
UV8b_6312
Heavy metal translocating P-type ATPase.
   
 0.463
UV8b_3353
Putative Cu-ATPase.
   
 0.463
UV8b_4200
Uncharacterized protein.
   
 0.463
UV8b_1102
Cation transport ATPase.
   
 0.463
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.