STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_8091DRAP deaminase. (524 aa)    
Predicted Functional Partners:
UV8b_478
Cytidine and deoxycytidylate deaminase.
  
 0.926
UV8b_2160
Riboflavin biosynthesis protein.
     
 0.825
UV8b_7745
Pseudouridine synthase TruD/Pus7.
    
 
 0.810
UV8b_192
GTPase family protein.
  
 
 0.767
UV8b_4144
Putative RNA methyltransferase.
  
 
 0.762
UV8b_8222
Putative ribosomal protein YmL8; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.752
UV8b_5313
60S ribosomal protein L16; Belongs to the universal ribosomal protein uL13 family.
  
   0.738
UV8b_739
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.728
UV8b_5463
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.705
UV8b_8258
GTP binding protein (EngB).
   
 
 0.700
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.