STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_6001Squalene synthase. (463 aa)    
Predicted Functional Partners:
UV8b_2287
Cytochrome P450 51B; Belongs to the cytochrome P450 family.
 
 
 0.984
UV8b_8264
C-5 sterol desaturase; Belongs to the sterol desaturase family.
  
 0.982
UV8b_602
Sterol delta 5,6-desaturase ERG3; Belongs to the sterol desaturase family.
  
 0.982
UV8b_5672
C-3 sterol dehydrogenase/C-4 decarboxylase family protein.
  
 
 0.980
UV8b_316
C-4 sterol methyl oxidase; Belongs to the sterol desaturase family.
  
 0.978
UV8b_7061
2-heptaprenyl-6-methoxy-1,4-benzoquinone methyltransferase.
   
 0.969
UV8b_3438
Sterol 24-C-methyltransferase; Catalyzes the methyl transfer from S-adenosyl-methionine to the C-24 of zymosterol to form fecosterol.
   
 0.969
UV8b_858
3-ketosteroid reductase.
   
 
 0.968
UV8b_8174
Sterol desaturase family; Belongs to the sterol desaturase family.
  
 0.964
UV8b_3948
Transmembrane domain-containing protein.
   
 
 0.961
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.