STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_5174Uncharacterized protein. (673 aa)    
Predicted Functional Partners:
UV8b_1234
NADH pyrophosphatase.
    
  0.846
UV8b_1903
Putative Pol II transcription elongation factor subunit Cdc73.
    
 0.804
UV8b_1153
Putative anaphase control protein cut9.
    
 0.803
UV8b_4296
RNA polymerase-associated protein.
    
 0.801
UV8b_5232
Putative anaphase promoting complex subunit 10.
    
 0.799
UV8b_5424
Putative 20S cyclosome subunit (APC1/BimE).
    
 0.798
UV8b_418
Putative anaphase-promoting complex component Cut20/Apc4.
    
 0.798
UV8b_5291
Fungal specific transcription factor.
    
 0.794
UV8b_5292
Kinesin related protein 1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.794
UV8b_1588
Anaphase-promoting complex protein.
   
 0.794
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.