STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_6632ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family. (186 aa)    
Predicted Functional Partners:
UV8b_3608
RhoGAP domain containing protein.
    
 0.978
UV8b_584
Putative dock180 protein; Belongs to the DOCK family.
    
 0.923
UV8b_4566
Uncharacterized protein.
    
 0.920
UV8b_5945
Zinc finger protein gcs1.
    
 0.827
UV8b_6964
Sec7 domain-containing protein.
    
 0.820
UV8b_8351
Centaurin beta.
    
 0.818
UV8b_7543
Exocyst complex protein EXO70; Involved in the secretory pathway as part of the exocyst complex which tethers secretory vesicles to the sites of exocytosis. Also plays a role in the assembly of the exocyst. Belongs to the EXO70 family.
    
 0.807
UV8b_2302
ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
  
0.804
UV8b_7327
ArfGAP family protein.
    
 0.803
UV8b_4396
Uncharacterized protein.
   
 0.798
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.