STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_6588Arrestin domain containing protein. (1014 aa)    
Predicted Functional Partners:
UV8b_5915
Thioredoxin-like protein.
    
 0.727
UV8b_5864
Thioredoxin.
    
 0.727
UV8b_212
Thioredoxin.
    
 0.727
UV8b_6524
E3 ubiquitin-protein ligase.
    
 
 0.689
UV8b_1760
Thioredoxin-like protein.
    
 0.689
UV8b_6660
Disulfide isomerase.
    
 0.651
UV8b_5623
Protein disulfide-isomerase.
    
 0.651
UV8b_7197
C5 finger domain protein.
    
 0.651
UV8b_5652
Autophagy-related protein; Vacuolar effluxer which mediate the efflux of amino acids resulting from autophagic degradation. The release of autophagic amino acids allows the maintenance of protein synthesis and viability during nitrogen starvation; Belongs to the ATG22 family.
    
 0.651
UV8b_3682
Disulfide isomerase.
    
 0.651
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.