STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_4825Snf7 family protein. (212 aa)    
Predicted Functional Partners:
UV8b_6659
Uncharacterized protein.
   
 0.998
UV8b_3728
ESCRT-III component.
   
 0.988
UV8b_1069
Putative chromatin modifying protein 1b.
   
 0.988
UV8b_2530
ESCRT-III component.
   
 0.986
UV8b_2148
DUF292 domain-containing protein.
    
 
 0.951
UV8b_4511
SNF7 family protein.
   
 0.918
UV8b_5210
Charged multivesicular body protein 3.
   
 0.897
UV8b_5212
Charged multivesicular body protein 3.
   
 0.897
UV8b_6321
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.
 
      0.884
UV8b_3882
Snf7 family protein.
    
 0.884
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.