STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_4456Citrate synthase; Belongs to the citrate synthase family. (379 aa)    
Predicted Functional Partners:
UV8b_4457
Citrate synthase; Belongs to the citrate synthase family.
 
     0.951
UV8b_1185
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 0.928
UV8b_5265
ATP citrate lyase.
  
 0.882
UV8b_5263
ATP-citrate synthase subunit 1.
  
 0.882
UV8b_7585
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.880
UV8b_8261
Malate dehydrogenase.
  
 0.879
UV8b_4873
Malate dehydrogenase.
  
 0.879
UV8b_4114
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.865
UV8b_1283
Slx5 CSlx8 protein.
  
 0.863
UV8b_5186
Nonspecific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.858
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.