STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_5260Histone acetylase complex subunit MRG15-2. (176 aa)    
Predicted Functional Partners:
UV8b_7551
Chromatin assembly factor 1 subunit C.
   
 0.964
UV8b_2398
Enhancer of polycomb-like protein.
    
 0.953
UV8b_6064
Putative histone acetyltransferase subunit (Yaf9).
    
 0.940
UV8b_1156
Phosphatidylinositol kinase; Belongs to the PI3/PI4-kinase family.
   
 0.940
UV8b_5570
Putative PWI domain mRNA processing protein.
   
 0.934
UV8b_2116
Histone deacetylase RpdA/Rpd3.
    
 0.933
UV8b_8231
SWR1-complex protein 4.
    
 0.926
UV8b_7845
Actin; Belongs to the actin family.
   
 0.921
UV8b_3866
Putative signal transducer.
    
 0.903
UV8b_2128
CT20 family protein.
   
 0.897
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.