STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_596240S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability. (87 aa)    
Predicted Functional Partners:
UV8b_6822
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.983
UV8b_7751
40S ribosomal protein S22; Belongs to the universal ribosomal protein uS8 family.
   
 
 0.981
UV8b_1814
Pre-mRNA-splicing factor 38B.
   
 
 0.980
UV8b_6639
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
   0.972
UV8b_5364
60S ribosomal protein L30.
   
   0.965
UV8b_5829
40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
   
 
 0.958
UV8b_2732
Putative rRNA processing protein Bystin.
    
 
 0.958
UV8b_3623
RIO1 family protein.
    
   0.958
UV8b_2676
Low-temperature viability protein ltv1.
    
   0.958
UV8b_582
40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
   
   0.952
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.