STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_5095Long-chain acyl-CoA synthetases family protein. (308 aa)    
Predicted Functional Partners:
UV8b_5291
Fungal specific transcription factor.
    
 0.863
UV8b_5292
Kinesin related protein 1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.863
UV8b_5186
Nonspecific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.844
UV8b_5063
ER to Golgi transporter Yif1.
 
      0.831
UV8b_7942
BTB/POZ domain protein.
    
 0.790
UV8b_6881
BTB/POZ domain protein.
    
 0.790
UV8b_2594
BTB/POZ domain protein.
    
 0.790
UV8b_6262
Clr5 domain-containing protein.
    
 0.772
UV8b_5174
Uncharacterized protein.
    
 0.772
UV8b_1175
UBA/TS-N domain-containing protein.
    
 0.772
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.