STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_4911Putative kinetochore protein ndc-80. (696 aa)    
Predicted Functional Partners:
UV8b_5865
Putative kinetochore protein nuf2.
  
 0.999
UV8b_4473
Putative kinetochore protein SPC25.
   
 0.998
UV8b_2979
Kinase domain containing protein.
   
 0.985
UV8b_5028
Putative checkpoint protein kinase.
   
 
 0.984
UV8b_8082
Putative mitotic spindle checkpoint protein (Mad2).
   
 0.971
UV8b_4840
HEAT repeat containing protein.
    
 
 0.969
UV8b_2155
Condensin subunit.
   
 
 0.937
UV8b_8018
Kinesin related protein 2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.934
UV8b_2707
Putative serine/threonine protein kinase (Ark1); Belongs to the protein kinase superfamily.
   
 
 0.929
UV8b_2292
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.920
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.