STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_426440S ribosomal protein S27. (98 aa)    
Predicted Functional Partners:
UV8b_7910
40S ribosomal protein S17.
   
 0.999
UV8b_7671
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.999
UV8b_6822
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 0.999
UV8b_5829
40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
   
 0.999
UV8b_7751
40S ribosomal protein S22; Belongs to the universal ribosomal protein uS8 family.
   
 0.999
UV8b_4895
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.999
UV8b_5842
IBR domain-containing protein.
   
 0.999
UV8b_4423
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
 0.999
UV8b_6118
40s ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
 0.999
UV8b_6639
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.999
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.