STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_6230Uncharacterized protein. (1323 aa)    
Predicted Functional Partners:
UV8b_7905
HAD-superfamily subfamily cecr5.
   
 0.777
UV8b_3129
Phosphatidyl synthase.
   
 0.777
UV8b_5316
AP-2 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
    
  0.768
UV8b_788
AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
    
  0.730
UV8b_6287
Putative myosin MYO2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.712
UV8b_2979
Kinase domain containing protein.
    
  0.695
UV8b_6422
GTP-binding protein ypt3.
    
  0.681
UV8b_1175
UBA/TS-N domain-containing protein.
    
 0.676
UV8b_2147
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
  0.673
UV8b_5865
Putative kinetochore protein nuf2.
    
  0.672
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.