STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_5191Putative G2/M phase checkpoint control protein Sum2. (547 aa)    
Predicted Functional Partners:
UV8b_6365
ATP-dependent RNA helicase DHH1; Belongs to the DEAD box helicase family.
   
 
 0.992
UV8b_1279
YjeF-N domain protein.
    
 
 0.911
UV8b_5305
DCP1-like decapping family protein.
    
 
 0.869
UV8b_383
Uncharacterized protein.
    
 
 0.810
UV8b_384
Decapping enzyme DCP2.
    
 
 0.810
UV8b_6359
Uncharacterized protein.
   
 
 0.733
UV8b_4365
Chromo domain-containing protein 1.
   
 
 0.733
UV8b_5853
Topoisomerase II-associated protein PAT1.
   
 
 0.692
UV8b_3031
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
 
 0.675
UV8b_3034
PABC domain-containing protein.
    
 
 0.675
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.