STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_6181Putative serine-threonine rich protein. (324 aa)    
Predicted Functional Partners:
UV8b_2010
Putative MHYT domain signaling protein.
    
 0.792
UV8b_1531
Protein bli-3.
   
 0.756
UV8b_5899
Syntaxin.
   
 0.747
UV8b_3703
Uncharacterized protein.
   
 0.747
UV8b_1774
SANT SWI3, ADA2, N-coR and TFIIIB DNA-binding domain containing protein.
   
 0.747
UV8b_1618
SH3 domain containing protein.
    
 0.746
UV8b_438
Calmodulin; Belongs to the calmodulin family.
    
 0.738
UV8b_7622
Putative FYVE domain protein.
    
 0.736
UV8b_7660
Heat shock protein 90.
   
 0.733
UV8b_7659
Putative oxidoreductase.
   
 0.733
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.