STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_5301Putative TfdA family oxidoreductase. (148 aa)    
Predicted Functional Partners:
UV8b_6075
3-hydroxybutyryl-CoA dehydrogenase.
     
 0.667
UV8b_3219
Rhodanese domain-containing protein.
     
 0.646
UV8b_1868
Trimethyllysine dioxygenase.
     
 0.637
UV8b_6677
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
    
 0.612
UV8b_7180
Acetolactate synthase.
  
 
 0.604
UV8b_1246
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.573
UV8b_8276
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.568
UV8b_4026
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.568
UV8b_3907
Sulfite reductase beta subunit.
     
 0.566
UV8b_119
Fungal transcriptional regulatory protein.
  
 
 0.546
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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