STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_4112Glutathione-dependent formaldehyde dehydrogenase. (402 aa)    
Predicted Functional Partners:
UV8b_4926
Putative Fe-containing alcohol dehydrogenase.
   
 0.989
UV8b_6662
Zinc-binding dehydrogenase.
    
0.906
UV8b_3761
Phosphatase activator.
    
 0.846
NTH1
Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines.
 
      0.842
UV8b_1401
2,5-diketo-D-gluconic acid reductase A.
   
 0.840
UV8b_535
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.821
UV8b_3759
Peroxin 20.
    
 0.812
UV8b_5536
Pyruvate decarboxylase.
     
 0.803
UV8b_2490
Putative pyruvate decarboxylase.
     
 0.803
UV8b_2790
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.802
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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