STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_4897GTPase-activating protein GYP5. (904 aa)    
Predicted Functional Partners:
UV8b_3898
RAS small monomeric GTPase Rab6.
    
 0.751
UV8b_4504
Small GTP-binding protein YPTI.
    
 0.724
UV8b_2956
Putative BAR adaptor protein.
    
 
 0.644
UV8b_6113
MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
    
 0.608
UV8b_1301
Rab5-like protein ypt51.
    
 0.608
UV8b_305
Putative ras-like GTP-binding protein.
    
 0.608
UV8b_7406
VPS9 domain protein.
   
  0.588
UV8b_4795
Guanine nucleotide exchange factor Vps9.
   
  0.588
UV8b_4666
GAT domain-containing protein.
    
  0.562
UV8b_4566
Uncharacterized protein.
    
  0.562
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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