STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_5471Putative cell cycle protein kinase. (483 aa)    
Predicted Functional Partners:
UV8b_3805
DBF zinc finger domain-containing protein.
   
 0.999
UV8b_6943
DNA helicase; Belongs to the MCM family.
   
 0.996
UV8b_7544
DNA helicase; Belongs to the MCM family.
   
 0.990
UV8b_190
DNA helicase; Belongs to the MCM family.
   
 0.990
UV8b_3904
DNA helicase; Belongs to the MCM family.
   
 0.989
MCM7
DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...]
    
 0.987
UV8b_979
Protein kinase rad3; Belongs to the PI3/PI4-kinase family.
    
 0.987
UV8b_6790
Uncharacterized protein.
    
 
 0.983
UV8b_889
Cell division cycle protein.
   
 0.982
UV8b_4311
Cell division control protein 54.
   
 0.977
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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