STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_3627Vesicle-associated membrane protein; Belongs to the synaptobrevin family. (238 aa)    
Predicted Functional Partners:
UV8b_4497
t-SNARE coiled-coil homology domain-containing protein.
   
 0.988
UV8b_2967
Putative plasma membrane SNARE protein (Sec9).
    
 0.972
UV8b_5805
Vacuolar protein sorting 33A-like protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.946
UV8b_5192
Vesicle transport SNARE complex subunit protein.
    
 0.921
UV8b_3815
Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.
    
 
 0.889
UV8b_3365
SNARE domain-containing protein.
    
 0.878
UV8b_3016
SNARE domain-containing protein.
    
 0.878
UV8b_5122
Synaptobrevin.
    
0.856
UV8b_722
Vesicular-fusion protein sec17.
    
 0.836
UV8b_7143
AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.
    
 0.765
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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