STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_4356DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1138 aa)    
Predicted Functional Partners:
UV8b_4547
DNA mismatch repair protein MSH2; Component of the post-replicative DNA mismatch repair system (MMR).
  
0.999
UV8b_4967
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 
0.989
UV8b_5758
MutS2 protein.
  
0.981
UV8b_2349
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.969
UV8b_5907
MutL-like protein.
 
 0.965
UV8b_5005
DNA mismatch repair protein MUTl.
 
 0.948
UV8b_7530
Putative DNA mismatch repair protein PMS1.
 
 0.938
UV8b_6557
Sorting nexin mvp-1.
    
   0.936
UV8b_7766
MutL_C domain-containing protein.
  
 0.909
UV8b_1383
Exonuclease.
   
 0.851
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.