STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_4376Glutamyl-tRNA(Gln) amidotransferase subunit A. (548 aa)    
Predicted Functional Partners:
UV8b_5429
Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
 0.946
UV8b_54
Acetamidase.
  
 
 
0.792
UV8b_2129
Putative aspartate--tRNA ligase.
  
 0.777
UV8b_7509
Nitrilase.
    
 0.766
UV8b_2551
Glutamyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.734
UV8b_3656
Glutaminyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.666
UV8b_3925
Glutaminyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.666
UV8b_4018
Glutamyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.666
UV8b_6372
Asparaginyl-tRNA synthetase.
  
 0.662
UV8b_7676
Asparaginyl-tRNA synthetase.
  
 0.652
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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