STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_2555Prephenate dehydrogenase. (392 aa)    
Predicted Functional Partners:
UV8b_300
Histidinol-phosphate aminotransferase.
  
 
 0.984
UV8b_6032
Chorismate synthase.
  
 0.980
UV8b_1259
Trifunctional tryptophan biosynthesis enzyme.
    
 0.929
UV8b_1023
Chorismate mutase.
  
 0.918
NIP1
Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
 
      0.898
UV8b_5347
Anthranilate phosphoribosyltransferase.
    
 0.889
UV8b_1340
PDZ domain-containing protein.
  
 
 0.887
UV8b_2283
Putative L-kynurenine/alpha-aminoadipate aminotransferase.
    
 0.866
UV8b_1258
Trifunctional tryptophan biosynthesis enzyme.
    
 0.861
UV8b_4317
Sphingolipid long chain base-responsive protein PIL1.
  
 
 0.860
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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