STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_2590Peroxisomal ABC transporter. (715 aa)    
Predicted Functional Partners:
UV8b_593
ATP-binding cassette protein.
  
 
0.903
UV8b_2591
Peroxisomal ABC transporter.
 
      0.899
UV8b_3041
Peroxin.
    
 0.848
UV8b_1713
Peroxin 3.
   
 0.807
UV8b_2076
Putative lysosomal cobalamin transporter.
    
 0.751
UV8b_3772
Peroxisomal biogenesis factor.
   
 
 0.731
UV8b_6129
Pex13 protein.
   
 
 0.730
UV8b_5186
Nonspecific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.704
UV8b_3401
Peroxisomal membrane protein PEX16.
     
 0.700
UV8b_4910
Putative peroxisomal membrane anchor protein (Pex14).
    
 0.697
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.