STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_5083Putative nuclear distribution protein RO10. (203 aa)    
Predicted Functional Partners:
UV8b_1130
Endosome-associated ubiquitin isopeptidase (AmsH).
    
 0.821
UV8b_7232
Ubiquitin.
    
 0.807
UV8b_6917
Uncharacterized protein.
   
 0.805
UV8b_7223
Ubiquitin carboxyl-terminal hydrolase 2.
    
 0.802
UV8b_7225
Vacuolar protein sorting-associated protein 27.
   
 0.795
UV8b_7224
Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.
   
 0.795
UV8b_6123
Uncharacterized protein.
   
 0.795
UV8b_2077
Zinc finger FYVE domain-containing protein.
   
 0.795
UV8b_6050
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.757
UV8b_7670
Ubiquitin.
   
 0.748
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.