STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_3006DNA binding domain with preference for A/T rich regions-like protein. (759 aa)    
Predicted Functional Partners:
UV8b_7698
Coiled-coil domain-containing protein.
    
 0.653
UV8b_7767
Uncharacterized protein.
    
 0.653
UV8b_2302
ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
   
 
 0.568
UV8b_7134
Secretion pathway protein Sls2/Rcy1.
     
 0.564
UV8b_5635
Exocyst complex component Sec10.
     
 0.564
UV8b_2713
Exocyst complex component SEC15; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
     
 0.556
UV8b_632
Uncharacterized protein.
     
 0.546
UV8b_3590
RAB/GTPase.
     
 0.520
UV8b_317
ATP synthase regulation protein NCA2.
     
 0.520
UV8b_3007
F-box protein.
 
 
   0.480
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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