STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_3016SNARE domain-containing protein. (384 aa)    
Predicted Functional Partners:
UV8b_5122
Synaptobrevin.
    
 0.986
UV8b_2967
Putative plasma membrane SNARE protein (Sec9).
   
 0.978
UV8b_2773
Sec1 family superfamily; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.978
UV8b_722
Vesicular-fusion protein sec17.
    
 0.971
UV8b_5239
Vesicle fusion factor NSFI.
    
 0.940
UV8b_8012
Protein transport protein sec22; Belongs to the synaptobrevin family.
    
 0.906
UV8b_1378
Putative SNARE-dependent exocytosis protein (Sro7).
    
 0.904
UV8b_307
SNARE domain-containing protein; Belongs to the synaptobrevin family.
    
 0.888
UV8b_3627
Vesicle-associated membrane protein; Belongs to the synaptobrevin family.
    
 0.878
UV8b_4497
t-SNARE coiled-coil homology domain-containing protein.
    
 0.864
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.