STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_4859DUF5353 domain-containing protein. (202 aa)    
Predicted Functional Partners:
UV8b_4860
Myb_DNA-bind_3 domain-containing protein.
 
      0.886
UV8b_2010
Putative MHYT domain signaling protein.
    
  0.711
UV8b_7678
Chitin deacetylase.
    
 0.705
UV8b_4781
Putative polysaccharide deacetylase (NodB).
    
 0.705
UV8b_3630
Carbohydrate esterase family 4 protein.
    
 0.705
UV8b_1062
Cell wall glycoprotein.
    
 0.705
UV8b_7788
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
    
  0.637
UV8b_4740
Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A.
    
 0.578
UV8b_5313
60S ribosomal protein L16; Belongs to the universal ribosomal protein uL13 family.
   
 
  0.466
UV8b_4672
Ankyrin repeat-containing protein.
    
  0.458
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.