STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_1752G1/S-specific cyclin Pcl5. (715 aa)    
Predicted Functional Partners:
UV8b_4448
Uncharacterized protein.
    
 0.950
UV8b_3779
Cross-pathway control 1.
   
 0.905
UV8b_368
Negative regulator of the PHO system; Belongs to the protein kinase superfamily.
    
 0.903
UV8b_5718
Putative ankyrin repeat-containing protein.
    
 0.878
UV8b_522
Glycerophosphodiester phosphodiesterase GDE1.
    
 0.878
UV8b_6310
Cell division control protein; Belongs to the protein kinase superfamily.
    
 0.842
UV8b_7988
ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase.
    
 0.783
UV8b_1251
Serine/threonine-protein kinase.
    
  0.775
UV8b_3254
Ku70 protein.
    
 0.731
UV8b_5529
DNA ligase.
    
 0.723
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.