STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_1962Ribosomal protein L24E. (772 aa)    
Predicted Functional Partners:
UV8b_6972
Tryptophan synthase.
    
 0.810
UV8b_7905
HAD-superfamily subfamily cecr5.
  
 
 0.807
UV8b_3129
Phosphatidyl synthase.
  
 
 0.807
UV8b_5463
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.740
UV8b_410
Protein phosphatase PP2A regulatory subunit A.
    
 0.719
UV8b_7222
Long-chain acyl-CoA synthetases & Acyl-protein synthetase.
    
 0.626
UV8b_7849
Putative SMP2 protein.
     
 0.624
UV8b_6484
Protein phosphatase PP2A regulatory subunit B.
    
 0.615
UV8b_1259
Trifunctional tryptophan biosynthesis enzyme.
   
 0.614
UV8b_2976
Putative diacylglycerol acyltransferase type 2a.
     
 0.607
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.