STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_3473TBC domain protein. (1076 aa)    
Predicted Functional Partners:
UV8b_18
Putative septum initiation protein sid3.
    
 0.902
UV8b_4758
Serine/threonine protein kinase.
    
 0.858
UV8b_685
Putative cytokinesis inhibitor byr4.
    
 0.819
UV8b_2860
DUF1740-domain-containing protein.
    
 0.800
UV8b_3590
RAB/GTPase.
    
 0.764
UV8b_317
ATP synthase regulation protein NCA2.
    
 0.764
UV8b_216
Putative Ras-related protein Rab7.
    
 0.741
UV8b_6632
ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
    
 0.726
UV8b_8104
Tyrosine-protein phosphatase CDC14.
    
 
 0.720
UV8b_6331
Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.
   
 0.629
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.