STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_3780Endosomal peripheral membrane protein. (92 aa)    
Predicted Functional Partners:
UV8b_4385
Putative regulator of reproduction DopA.
   
 
 0.941
UV8b_203
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
   
 
 0.634
UV8b_7601
ADP-ribosylation factor-like protein 1.
    
 
 0.616
UV8b_1289
ADP-ribosylation factor family protein.
    
 
 0.532
UV8b_3608
RhoGAP domain containing protein.
   
  
 0.453
UV8b_428
Cell division control protein.
    
 
 0.450
UV8b_3914
Putative guanyl-nucleotide exchange factor (Sec7).
   
 
 0.423
UV8b_962
DUF1713 domain protein.
    
 
 0.415
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.