STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_1327Uncharacterized protein. (254 aa)    
Predicted Functional Partners:
UV8b_6168
KOW motif containing protein.
  
 
   0.708
UV8b_7015
Putative 37S ribosomal protein S18.
   
   0.600
UV8b_3570
Putative ribosomal protein L23.
   
   0.589
UV8b_3036
30S ribosomal protein S7.
   
   0.588
UV8b_8165
37S ribosomal protein S11.
    
   0.577
UV8b_7943
60S ribosomal protein L20.
    
   0.577
UV8b_7911
Uncharacterized protein.
    
   0.577
UV8b_7577
Ribosomal protein s17.
    
   0.577
UV8b_6556
50S ribosomal subunit protein L15.
    
   0.577
UV8b_8162
Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
    
   0.577
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.