STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_2769NAD dependent epimerase/dehydratase family protein. (266 aa)    
Predicted Functional Partners:
UV8b_4937
NADH-ubiquinone oxidoreductase-like protein; Belongs to the complex I 30 kDa subunit family.
   
 0.910
UV8b_7899
NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
 0.895
UV8b_5462
NADH-ubiquinone oxidoreductase 23 kDa subunit.
   
 0.895
UV8b_6840
NADH-ubiquinone oxidoreductase 49 kDa subunit; Belongs to the complex I 49 kDa subunit family.
   
 0.895
UV8b_681
NADH-ubiquinone oxidoreductase 78 kDa subunit; Belongs to the complex I 75 kDa subunit family.
   
 0.886
UV8b_1987
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.885
UV8b_6525
Mitochondrial NADH-ubiquinone oxidoreductase 20 kD subunit; Belongs to the complex I 20 kDa subunit family.
   
 0.880
UV8b_5485
NADH:ubiquinone oxidoreductase 14kD subunit.
   
 0.874
UV8b_3172
NADH:ubiquinone oxidoreductase 10.5kD subunit.
   
 0.872
UV8b_4924
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
   
 0.871
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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