STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_1738Importin 13. (987 aa)    
Predicted Functional Partners:
UV8b_3040
Ubiquitin-conjugating enzyme E2-18 kDa; Belongs to the ubiquitin-conjugating enzyme family.
   
 
 0.954
UV8b_2071
RNA-binding protein 8A.
    
 
 0.927
UV8b_5568
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 
 0.920
UV8b_1745
Eukaryotic translation initiation factor eIF-1A; Belongs to the eIF-1A family.
    
 
 0.904
UV8b_7470
Putative bifunctional purine biosynthetic protein Ade1.
   
 0.898
UV8b_3216
Eukaryotic translation initiation factor 5A.
    
 
 0.799
UV8b_6664
Phosphoribosylglycinamide formyltransferase.
   
 0.776
UV8b_24
Formyltetrahydrofolate deformylase.
   
 0.776
UV8b_2248
Putative transcription factor TFIIA complex subunit Toa1.
    
 
 0.500
UV8b_2570
Importin beta-3 subunit.
   
  
 0.494
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.