STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_2523Uncharacterized protein. (621 aa)    
Predicted Functional Partners:
UV8b_3060
Nucleoporin NSP1.
   
 0.999
UV8b_5568
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.984
UV8b_5246
Exportin-1.
   
 
 0.929
UV8b_2236
Putative nucleoporin-interacting protein NIC96.
   
 0.921
UV8b_5341
Ran GTPase activating protein 1.
   
 0.919
UV8b_2908
Uncharacterized protein.
   
 0.919
UV8b_7900
Putative nuclear pore protein NUP57.
   
 0.914
UV8b_3011
Putative ubiquitin-like modifier SUMO.
   
 0.900
UV8b_8340
DNA-directed RNA polymerases I and III 40 kDa polypeptide.
   
 0.891
UV8b_3010
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.890
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.