Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| MED17 | UV8b_1220 | A0A063C0V8 | A0A063C971 | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.982 |
| MED17 | UV8b_1420 | A0A063C0V8 | A0A063C5E2 | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Zn(2)-C6 fungal-type domain-containing protein. | 0.674 |
| MED17 | UV8b_2279 | A0A063C0V8 | A0A063C5V6 | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.996 |
| MED17 | UV8b_2838 | A0A063C0V8 | A0A063C4J2 | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Putative short-chain dehydrogenase. | 0.994 |
| MED17 | UV8b_7316 | A0A063C0V8 | A0A063BSS5 | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | OB domain-containing protein. | 0.694 |
| UV8b_1220 | MED17 | A0A063C971 | A0A063C0V8 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.982 |
| UV8b_1220 | UV8b_1420 | A0A063C971 | A0A063C5E2 | Uncharacterized protein. | Zn(2)-C6 fungal-type domain-containing protein. | 0.681 |
| UV8b_1220 | UV8b_2279 | A0A063C971 | A0A063C5V6 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.983 |
| UV8b_1220 | UV8b_2838 | A0A063C971 | A0A063C4J2 | Uncharacterized protein. | Putative short-chain dehydrogenase. | 0.978 |
| UV8b_1220 | UV8b_7316 | A0A063C971 | A0A063BSS5 | Uncharacterized protein. | OB domain-containing protein. | 0.694 |
| UV8b_1420 | MED17 | A0A063C5E2 | A0A063C0V8 | Zn(2)-C6 fungal-type domain-containing protein. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.674 |
| UV8b_1420 | UV8b_1220 | A0A063C5E2 | A0A063C971 | Zn(2)-C6 fungal-type domain-containing protein. | Uncharacterized protein. | 0.681 |
| UV8b_1420 | UV8b_1748 | A0A063C5E2 | A0A063C487 | Zn(2)-C6 fungal-type domain-containing protein. | MUS38-like protein. | 0.685 |
| UV8b_1420 | UV8b_2279 | A0A063C5E2 | A0A063C5V6 | Zn(2)-C6 fungal-type domain-containing protein. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.676 |
| UV8b_1420 | UV8b_2838 | A0A063C5E2 | A0A063C4J2 | Zn(2)-C6 fungal-type domain-containing protein. | Putative short-chain dehydrogenase. | 0.674 |
| UV8b_1420 | UV8b_4674 | A0A063C5E2 | A0A063BZA8 | Zn(2)-C6 fungal-type domain-containing protein. | Putative histone-lysine N-methyltransferase (Ash1). | 0.731 |
| UV8b_1420 | UV8b_5660 | A0A063C5E2 | A0A063BWH1 | Zn(2)-C6 fungal-type domain-containing protein. | NPL4 family protein. | 0.675 |
| UV8b_1420 | UV8b_7316 | A0A063C5E2 | A0A063BSS5 | Zn(2)-C6 fungal-type domain-containing protein. | OB domain-containing protein. | 0.736 |
| UV8b_1420 | UV8b_7551 | A0A063C5E2 | A0A063BTE6 | Zn(2)-C6 fungal-type domain-containing protein. | Chromatin assembly factor 1 subunit C. | 0.694 |
| UV8b_1420 | UV8b_7951 | A0A063C5E2 | A0A063BRG1 | Zn(2)-C6 fungal-type domain-containing protein. | Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. | 0.673 |
page 1 of 3