Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| UV8b_1986 | UV8b_2403 | A0A063CA49 | A0A063C5Q6 | DNA damage-binding protein 1. | Serine/threonine-protein kinase bur-1. | 0.762 |
| UV8b_1986 | UV8b_3969 | A0A063CA49 | A0A063C3P9 | DNA damage-binding protein 1. | Putative cell division cycle related protein kinase 7. | 0.762 |
| UV8b_1986 | UV8b_4348 | A0A063CA49 | A0A063BVI9 | DNA damage-binding protein 1. | Cyclin; Belongs to the cyclin family. | 0.756 |
| UV8b_1986 | UV8b_6291 | A0A063CA49 | A0A063BPP0 | DNA damage-binding protein 1. | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | 0.419 |
| UV8b_1986 | UV8b_7135 | A0A063CA49 | A0A063BS47 | DNA damage-binding protein 1. | Serine/threonine-protein kinase; Belongs to the protein kinase superfamily. | 0.700 |
| UV8b_1986 | UV8b_7920 | A0A063CA49 | A0A063BL20 | DNA damage-binding protein 1. | C-type cyclin; Belongs to the cyclin family. | 0.566 |
| UV8b_1986 | UV8b_941 | A0A063CA49 | A0A063C9Z5 | DNA damage-binding protein 1. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.921 |
| UV8b_2385 | UV8b_2403 | A0A063C8E9 | A0A063C5Q6 | Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | Serine/threonine-protein kinase bur-1. | 0.832 |
| UV8b_2385 | UV8b_3969 | A0A063C8E9 | A0A063C3P9 | Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | Putative cell division cycle related protein kinase 7. | 0.778 |
| UV8b_2385 | UV8b_4348 | A0A063C8E9 | A0A063BVI9 | Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | Cyclin; Belongs to the cyclin family. | 0.849 |
| UV8b_2385 | UV8b_5473 | A0A063C8E9 | A0A063BUG8 | Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. | 0.898 |
| UV8b_2385 | UV8b_6291 | A0A063C8E9 | A0A063BPP0 | Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | 0.999 |
| UV8b_2385 | UV8b_7135 | A0A063C8E9 | A0A063BS47 | Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | Serine/threonine-protein kinase; Belongs to the protein kinase superfamily. | 0.824 |
| UV8b_2385 | UV8b_7920 | A0A063C8E9 | A0A063BL20 | Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | C-type cyclin; Belongs to the cyclin family. | 0.778 |
| UV8b_2385 | UV8b_941 | A0A063C8E9 | A0A063C9Z5 | Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.994 |
| UV8b_2403 | UV8b_1986 | A0A063C5Q6 | A0A063CA49 | Serine/threonine-protein kinase bur-1. | DNA damage-binding protein 1. | 0.762 |
| UV8b_2403 | UV8b_2385 | A0A063C5Q6 | A0A063C8E9 | Serine/threonine-protein kinase bur-1. | Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | 0.832 |
| UV8b_2403 | UV8b_3969 | A0A063C5Q6 | A0A063C3P9 | Serine/threonine-protein kinase bur-1. | Putative cell division cycle related protein kinase 7. | 0.753 |
| UV8b_2403 | UV8b_4348 | A0A063C5Q6 | A0A063BVI9 | Serine/threonine-protein kinase bur-1. | Cyclin; Belongs to the cyclin family. | 0.991 |
| UV8b_2403 | UV8b_5473 | A0A063C5Q6 | A0A063BUG8 | Serine/threonine-protein kinase bur-1. | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. | 0.802 |
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