STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_1555FAD binding domain containing protein. (398 aa)    
Predicted Functional Partners:
UV8b_1556
SWIB/MDM2 domain protein.
 
      0.680
UV8b_6107
Ubiquitin hydrolase family protein.
    
  0.592
UV8b_4068
Ubiquitin carboxyl-terminal hydrolase.
    
  0.592
UV8b_4586
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
  0.588
UV8b_5316
AP-2 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
    
  0.583
UV8b_6220
Transporter ATM1.
    
 0.582
UV8b_2632
Acetyl-CoA carboxylase.
   
 0.577
UV8b_2126
ENTH domain containing protein.
    
 0.575
UV8b_278
Dynein heavy chain, cytoplasmic.
   
  0.571
UV8b_7143
AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.
   
  0.567
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.